Coalescent theory
Backward-in-time models of the genealogy of a sample of genes, from Kingman's coalescent and its generalizations to the site frequency spectrum, recombination and population structure.
- Hudson–Kaplan bound on recombination events
- Kingman's coalescent and Watterson's estimator
- Ancestral lineage counting and Tavaré's formula
- Expected site frequency spectrum
- Partition-valued Kingman coalescent
- Ranked labeled histories of coalescent trees
- Multispecies coalescent
- Segregating sites and pairwise differences
- Site frequency spectrum under variable population size
- Skyline plot estimates of population size
- Structured coalescent
- Two-locus coalescent
- Λ-coalescents
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